Log-Rank Test as A Continuation of The Kaplan-Meier Method in Survival Analysis Using R Language (Case Study: D-penicillamine Treatment on the Probabillity of Survival in Primary Biliary Cirrhosis (PBC) Patients at the Mayo Clinic)

Authors

  • Ferennia Putri Program Studi Matematika, Fakultas Pendidikan Matematika dan Ilmu Pengetahuan, Universitas Pendidikan Indonesia, Indonesia
  • BAP Martadiputra Program Studi Matematika, Fakultas Pendidikan Matematika dan Ilmu Pengetahuan, Universitas Pendidikan Indonesia, Indonesia
  • Lukman Lukman Program Studi Matematika, Fakultas Pendidikan Matematika dan Ilmu Pengetahuan, Universitas Pendidikan Indonesia, Indonesia

DOI:

https://doi.org/10.20956/j.v21i1.36073

Keywords:

Kaplan-Meier, D-penicillamine, Log-Rank Test, Cirrhosis

Abstract

From 1974 to 1984, Mayo Clinic conducted a D-penicillamine trial to improve the chances of survival of PBC patients. Mayo Clinic conducted a randomized placebo-controlled trial on patients to compare D-penicillamine with D-penicillamine. Mayo Clinic considered other variables besides the time of death or censored time in its study, namely the variables of Ascites, Hepatomegaly, Spider or the presence of esophageal varices, and other PBC symptom variables. Therefore, the author conducted this study to find out D-penicillamine as a drug treatment for PBC by only looking at the variable of time of death or censored time and the variable of drug treatment received by patients during the ten-year data collection period and completing the study with statistical science. Based on that, the author used survival analysis with the Kaplan-Meier and Log-Rank methods to find D-penicillamine as a PBC drug treatment. This study shows how to complete the analysis using the R language. The study results showed that D-penicillamine treatment was not good enough to increase the survival chances of PBC patients

References

Abdullah, S., 2020. Metode Kaplan-Meier. Prodi Statistika UI. dari www.youtube.com.

Adrian, K., 2021. Placebo, Obat Semu yang Bisa Membuat Orang Merasa Lebih Sehat. Alodokter. https://www.alodokter.com/placebo-obat-semu-yang-bisa-membuat-orang-merasa-lebih-sehat.

Budhiarta, D. M. F., 2017. Penatalaksanaan dan Edukasi Pasien Sirosis Hati dengan Varises Esofagus di RSUP Sanglah Denpasar Tahun 2014. Intisari Sains Medis, Vol. 8, No. 1, 19-23.

Cook, A., 2008. Kaplan Meier Estimate of S(t). National University of Singapore. Singapore.

Deiss, A., Lynch, R. E., Lee, G. R., & Cartwright, G. E., 1971. Long-term Therapy of Wilson's Disease. Annals of Internal Medicine, Vol. 75, No. 1, 57-65.

Fedesoriano, 2021. Cirrhosis Prediction Dataset. Retrieved [Date Retrieved] from https://www.kaggle.com/fedesoriano/cirrhosis-prediction-dataset.

Firsawan, I., Debataraja, N. N., & Rizki, S. W., 2022. Analisis Survival pada Data Tersensor Tipe I dengan Metode Kaplan Meier. Bimaster: Buletin Ilmiah Matematika, Statistika dan Terapannya, Vol. 11, No. 1.

Gayatri, D., 2005. Mengenal Analisis Ketahanan (Survival Analysis). Jurnal Keperawatan Indonesia, Vol. 9, No. 1. https://doi.org/10.7454/jki.v9i1.158.

Ginting, D., 2009. Structural Equation Model (SEM). Media Informatika, Vol. 8, No. 3, 121-123.

Gong, Y., Frederiksen, S. L., & Gluud, C., 2004. D-penicillamine for Primary Biliary Cirrhosis. The Cochrane Database of Systematic Reviews, 2004(4). https://doi.org/10.1002/14651858.CD004789.pub2.

Herrhyanto, Nar & Gantini, T., 2009. Pengantar Statistika Matematis. Yrama Widya, Bandung.

Khoiri, H., 2018. Analisis Data Survival dengan Survival Least Square-Svm (Studi Simulasi dan Studi Kasus Pasien Kanker Serviks). Tesis, Institut Teknologi Sepuluh Nopember.

James, O.F.W., 1985. D-penicillamine for Primary Biliary Cirrhosis. Newcastle-upon-Tyne, Vol. 26, 111.

Kleinbaum, D. G., & Klein, M., 2012. Survival Analysis: A Self-Learning Text, Third Edition. Springer Publisher, New York. Chapter 1, 4-13.

Kleinbaum, D. G., & Klein, M., 2012. Survival Analysis: A Self-Learning Text, Third Edition. Springer Publisher, New York. Chapter 2, 67-73.

Kosourova, E., 2022. RStudio Tutorial. Datacamp. https://www.datacamp.com/tutorial/r-studio-tutorial.

Latumeten, R., Lesnussa, Y.A., & Rumlawang, F.Y., 2018. Penggunaan Structural Equation Modeling (SEM) untuk Menganalisis Faktor yang Mempengaruhi Loyalitas Nasabah (Studi Kasus : PT Bank Negara Indonesia (BNI) KCU Ambon. Sainmatika: Jurnal Ilmiah Matematika dan Ilmu Pengetahuan Alam, Vol. 15, No. 2, 80.

Lawless, J. F., 2003. The Statistical Analysis of Recurrent Event. Springer Science+Business Media Inc, New York.

Maruddani, dkk., 2021. Survival Analysis. UNDIP Press Semarang, Semarang.

Maulid, R., 2022. Kriteria Jenis Teknik Analisis Data dalam Forecasting. https://dqlab.id/kriteria-jenis-teknik-analisis-data-dalam-forecasting.

Murtaugh P.A., Dickson, E.R., Van Dam G.M., dkk., 1994. Primary Biliary Cirrhosis: Prediction of Short-term Survival Based on Repeated Patient Visits. Hepatology, Vol. 20, No. 1, 126-128.

Muhajir, M., & Palupi, Y. D., 2018. Analisis Survival terhadap Pasien Diare Anak Mengunakan Metode Kaplan Meier dan Uji Log Rank. Jurnal Ilmu-Ilmu MIPA, Vol. 18, No. 1, 74-84.

Purba, B.T. & Sinurat, L. R., 2018. Peningkatan Status Gizi Pasien Sirosis Hepatis Melalui Regimen Nutrisi di RS Sari Mutiara Medan. Idea Nursing Jurnal, Vol. 9, No. 2, 1-6.

Rachmawati, R., 2020. Model Kaplan-Meier Menggunakan R Studio. Ramya Rachmawati, www.youtube.com.

RevoU., 2023. 9 Library Python Terbaik untuk Data Analytics. RevoU. https://revou.co/panduan-teknis/library.

Robi, M., Kusnandar, D., & Sulistianingsih, E., 2017. Penerapan Structural Equation Modeling (SEM) untuk Analisis Kompetensi Alumni. Buletin Ilmiah Math. Stat. dan Terapannya (Bimaster), Vol. 6, No. 2, 113-120.

Rosadi, D., 2016. Analisis Statistika dengan R. Gadjah Mada University Press, Yogyakarta

Ruslianah, I., 2023. Analisis Ketahanan Hidup dengan Model Cox Proportional Hazard pada Pasien Covid-19 di Rumah Sakit Paru Dr. H. A. Rotinsulu Bandung. Skripsi Sarjana, Universitas Pendidikan Indonesia.

Schutte, D., 2019. Survival Analysis in R For Beginners. Datacamp. https://www.datacamp.com/tutorial/survival-analysis-R.

Sternlieb, I., & Scheinberg, I. H., 1964. Penicillamine Therapy for Hepatolenticular Degeneration. JAMA, Vol. 189, No. 10, 748-754.

Suhartini, A., Rahmawati, R., & Suparti, S., 2018. Analisis Kurva Survival Kaplan Meier Menggunakan Uji Log Rank (Studi Kasus :Pasien Penyakit Jantung Koroner di RSUD Undata Palu). Jurnal Gaussian, Vol.7, No. 1, 33-42. https://doi.org/10.14710/j.gauss.7.1.33-42.

Sutadi, S. M., 2003. Sirosis Hepatitis. Internal Medicine of Medical Faculty Sumatera Utara University.

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Published

2024-09-15

How to Cite

Putri, F. ., Martadiputra, B. ., & Lukman, L. (2024). Log-Rank Test as A Continuation of The Kaplan-Meier Method in Survival Analysis Using R Language (Case Study: D-penicillamine Treatment on the Probabillity of Survival in Primary Biliary Cirrhosis (PBC) Patients at the Mayo Clinic). Jurnal Matematika, Statistika Dan Komputasi, 21(1), 285–306. https://doi.org/10.20956/j.v21i1.36073

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Research Articles